CDS

Accession Number TCMCG007C50607
gbkey CDS
Protein Id XP_018509480.1
Location complement(join(20847054..20847230,20847320..20847436,20847614..20847775,20847893..20848048,20848152..20848379,20848586..20848774,20848961..20849066,20849147..20849277,20849360..20849422,20849523..20849601,20849829..20849971,20850178..20850285,20850470..20850529,20850610..20850666,20850827..20850946,20851059..20851202,20851323..20851467,20851584..20851685,20851767..20851834,20852068..20852163,20852350..20852489,20852573..20852785,20852867..20853029))
Gene LOC103836160
GeneID 103836160
Organism Brassica rapa

Protein

Length 988aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA249065
db_source XM_018653964.2
Definition vacuolar sorting protein 18 [Brassica rapa]

EGGNOG-MAPPER Annotation

COG_category U
Description Vacuolar protein sorting-associated protein 18 homolog
KEGG_TC -
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko00001        [VIEW IN KEGG]
ko04131        [VIEW IN KEGG]
KEGG_ko ko:K20181        [VIEW IN KEGG]
EC -
KEGG_Pathway ko04138        [VIEW IN KEGG]
map04138        [VIEW IN KEGG]
GOs GO:0000325        [VIEW IN EMBL-EBI]
GO:0003674        [VIEW IN EMBL-EBI]
GO:0005488        [VIEW IN EMBL-EBI]
GO:0005515        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005737        [VIEW IN EMBL-EBI]
GO:0005768        [VIEW IN EMBL-EBI]
GO:0005773        [VIEW IN EMBL-EBI]
GO:0005774        [VIEW IN EMBL-EBI]
GO:0006810        [VIEW IN EMBL-EBI]
GO:0006811        [VIEW IN EMBL-EBI]
GO:0006820        [VIEW IN EMBL-EBI]
GO:0006869        [VIEW IN EMBL-EBI]
GO:0006887        [VIEW IN EMBL-EBI]
GO:0006904        [VIEW IN EMBL-EBI]
GO:0006996        [VIEW IN EMBL-EBI]
GO:0007032        [VIEW IN EMBL-EBI]
GO:0007033        [VIEW IN EMBL-EBI]
GO:0007034        [VIEW IN EMBL-EBI]
GO:0007040        [VIEW IN EMBL-EBI]
GO:0007041        [VIEW IN EMBL-EBI]
GO:0007275        [VIEW IN EMBL-EBI]
GO:0007610        [VIEW IN EMBL-EBI]
GO:0007632        [VIEW IN EMBL-EBI]
GO:0007634        [VIEW IN EMBL-EBI]
GO:0008104        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008333        [VIEW IN EMBL-EBI]
GO:0009314        [VIEW IN EMBL-EBI]
GO:0009416        [VIEW IN EMBL-EBI]
GO:0009605        [VIEW IN EMBL-EBI]
GO:0009628        [VIEW IN EMBL-EBI]
GO:0009653        [VIEW IN EMBL-EBI]
GO:0009705        [VIEW IN EMBL-EBI]
GO:0009790        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0010015        [VIEW IN EMBL-EBI]
GO:0010256        [VIEW IN EMBL-EBI]
GO:0010876        [VIEW IN EMBL-EBI]
GO:0012505        [VIEW IN EMBL-EBI]
GO:0015711        [VIEW IN EMBL-EBI]
GO:0015718        [VIEW IN EMBL-EBI]
GO:0015721        [VIEW IN EMBL-EBI]
GO:0015849        [VIEW IN EMBL-EBI]
GO:0015850        [VIEW IN EMBL-EBI]
GO:0016020        [VIEW IN EMBL-EBI]
GO:0016043        [VIEW IN EMBL-EBI]
GO:0016050        [VIEW IN EMBL-EBI]
GO:0016192        [VIEW IN EMBL-EBI]
GO:0021700        [VIEW IN EMBL-EBI]
GO:0022406        [VIEW IN EMBL-EBI]
GO:0022622        [VIEW IN EMBL-EBI]
GO:0030154        [VIEW IN EMBL-EBI]
GO:0030674        [VIEW IN EMBL-EBI]
GO:0030897        [VIEW IN EMBL-EBI]
GO:0030903        [VIEW IN EMBL-EBI]
GO:0031090        [VIEW IN EMBL-EBI]
GO:0031338        [VIEW IN EMBL-EBI]
GO:0031410        [VIEW IN EMBL-EBI]
GO:0031982        [VIEW IN EMBL-EBI]
GO:0032501        [VIEW IN EMBL-EBI]
GO:0032502        [VIEW IN EMBL-EBI]
GO:0032879        [VIEW IN EMBL-EBI]
GO:0032940        [VIEW IN EMBL-EBI]
GO:0032991        [VIEW IN EMBL-EBI]
GO:0033036        [VIEW IN EMBL-EBI]
GO:0033043        [VIEW IN EMBL-EBI]
GO:0033059        [VIEW IN EMBL-EBI]
GO:0033263        [VIEW IN EMBL-EBI]
GO:0035542        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0043254        [VIEW IN EMBL-EBI]
GO:0043473        [VIEW IN EMBL-EBI]
GO:0043476        [VIEW IN EMBL-EBI]
GO:0043482        [VIEW IN EMBL-EBI]
GO:0043485        [VIEW IN EMBL-EBI]
GO:0044087        [VIEW IN EMBL-EBI]
GO:0044422        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044425        [VIEW IN EMBL-EBI]
GO:0044433        [VIEW IN EMBL-EBI]
GO:0044437        [VIEW IN EMBL-EBI]
GO:0044440        [VIEW IN EMBL-EBI]
GO:0044444        [VIEW IN EMBL-EBI]
GO:0044446        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0045176        [VIEW IN EMBL-EBI]
GO:0046903        [VIEW IN EMBL-EBI]
GO:0046907        [VIEW IN EMBL-EBI]
GO:0046942        [VIEW IN EMBL-EBI]
GO:0048066        [VIEW IN EMBL-EBI]
GO:0048069        [VIEW IN EMBL-EBI]
GO:0048278        [VIEW IN EMBL-EBI]
GO:0048364        [VIEW IN EMBL-EBI]
GO:0048468        [VIEW IN EMBL-EBI]
GO:0048513        [VIEW IN EMBL-EBI]
GO:0048568        [VIEW IN EMBL-EBI]
GO:0048731        [VIEW IN EMBL-EBI]
GO:0048757        [VIEW IN EMBL-EBI]
GO:0048856        [VIEW IN EMBL-EBI]
GO:0048869        [VIEW IN EMBL-EBI]
GO:0050789        [VIEW IN EMBL-EBI]
GO:0050794        [VIEW IN EMBL-EBI]
GO:0050896        [VIEW IN EMBL-EBI]
GO:0050931        [VIEW IN EMBL-EBI]
GO:0051049        [VIEW IN EMBL-EBI]
GO:0051128        [VIEW IN EMBL-EBI]
GO:0051179        [VIEW IN EMBL-EBI]
GO:0051234        [VIEW IN EMBL-EBI]
GO:0051640        [VIEW IN EMBL-EBI]
GO:0051641        [VIEW IN EMBL-EBI]
GO:0051649        [VIEW IN EMBL-EBI]
GO:0051716        [VIEW IN EMBL-EBI]
GO:0060034        [VIEW IN EMBL-EBI]
GO:0060035        [VIEW IN EMBL-EBI]
GO:0060036        [VIEW IN EMBL-EBI]
GO:0060090        [VIEW IN EMBL-EBI]
GO:0060627        [VIEW IN EMBL-EBI]
GO:0065007        [VIEW IN EMBL-EBI]
GO:0071702        [VIEW IN EMBL-EBI]
GO:0071840        [VIEW IN EMBL-EBI]
GO:0080171        [VIEW IN EMBL-EBI]
GO:0097708        [VIEW IN EMBL-EBI]
GO:0098588        [VIEW IN EMBL-EBI]
GO:0098796        [VIEW IN EMBL-EBI]
GO:0098805        [VIEW IN EMBL-EBI]
GO:0099023        [VIEW IN EMBL-EBI]
GO:0099402        [VIEW IN EMBL-EBI]
GO:0140029        [VIEW IN EMBL-EBI]
GO:0140056        [VIEW IN EMBL-EBI]
GO:1905392        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGGATCAAGGAAGGCAAGTGTTTGCAGTGGATCTTCTCGAGAGATATGCCACAAAGAATCGTGGCATGATCACATGTATGGCTTCTGGAAACGATGTGATTGTTCTTGGAACAAGCAAAGGATGGATCATCCGCCACGATTTTGGACTTGGGAGTTCTTATGATATTGATCTCTCTGTTGGTCGAACTGGGGACCAATCGATCCACAAGGTTTTTGTTGATCCTGGTGGTAGCCATTGCGTTGCTACGGTGACTGGTGTTGGAGGAGCTGAGACTTTTTACACTCATGCTAAATGGCCTAAGCCGCGTGTCTTGAGCCGTTTGAAAGGCTTGCTGGTTAACGCGGTGGCTTGGAACAAGCAGCAGATAACAGAAGTTTCAACTAAGGAGATCATCCTTGGCACTCAGGATGGGCAGCTGTTTGAGATGGCTGTCGATGAGAAGGATAAGAGAGAGAAGTACGTCAAGTTTTTGTTCGAACTTGAAGAACTTCCCGAGGCCTTCATGGATTTACAGATGGAAACAGCCAACATAAGCAGTGGAATGAGGTACTATGTGATGGCTGTAACTCCTACTCGACTCTATTCCTTCACCGGGATTGGAACATTAGAATCTGTCTTTGCTAGTTATAAAGAACGTGCAGTTCGTTTTATGGAACTTCCTGGTGAAATACCAAACAGTGAACTACATTTCTTTATAAAGCAACGAAGAGCGGTGCATTTTGCATGGCTTTCAGGAACAGGAATTTATCATGGTGGCCTAAATTTTGGAGCTCAGCACAGTAATCCAAATGGTGATGAGAACTTTGTGGAGAGCAAAGCGCTGTTGGACTACTCAAAACTGAGTGATGGCACTGAGGTAGTCAAGCCTAGTTCAATGGCACTCTCAGAGTATCATTTCTTGCTTCTTATTGGGAATAAGGTTAAGGTTGTGAATCGGATAAGTGAACAAATCATAGAAGAGCTCCATTTTGATATATCGGCTGATTCAGCTTCGAGGGGCATCATAGGACTTTGCAGCGATGCCTCTGCTGGCCTTTTCTATGCGTATGATCAGAATTCGATCTTCCAGGTTTCTGTAATTGACGAAAGCAGAGATATGTGGAAGGTTCACCTAGACTTGAAAGATTATGCTGCAGCTTTAGCAAACTGTCGTGACCCTCTCCAGAGAGACCAAGTTTATTTAGTTCAGGCAGAAGCTGCATTTGCCAACAAGGAATATCTACGAGCAGCATCATTCTATGCCAAAGTCAATTATGTAATATCTTTTGAAGAGGTCACCTTGAAGTTTATTAGTATAAACGAACTGGAATCTTTGAGAACATTCCTGTTGCGAAAGCTTGATACTCTCTCAAAGAACGATAAATGCCAAATTACGATGATATCAACATGGGCAACAGAGCTATATCTGGACAAGATAAATCGTCTGCTTTTGGAAGATGACACTGCTATAGAAAATCGTAACTCAGAGTATCACTCAGTCATTCAAGAATTCCGTGCTTTCATGAGCGACAGCAAGGATGTATTAGATGAGGCGACCACCATGAAACTTCTGGAGAGTTATGGTCGGGTTGAAGAGTTGGTATATTTTGCAAACCTGAAGGAGCAGTATGAAATCGTTATTCACCATTATATTCAGCAAGGGGAAGCAAAGAAGGCTTTGGAGGTGCTCCAGAAATCTTCAGTTTCAGAAGAGCTTCAGTATAAATTTGCGCCAGAGCTTATTATGCTTGACGCGTATGAAACCGTTGAAGCATGGATGGCCAGTAAAAATCTTAACCCAAGGAGACTAATTACTGCAATGATGCGTTACTCAAGCGAACCTCATGCAAAAAACGAGACACATGAAGTCATAAAATATCTTGAGTTTTGCGTCCACCAATTGCATAACGAGGATCCAGGGATTCACAATTTACTTCTCTCATTATATGCCAAGCAGGAAGATGACAGTGCTCTTCTCCGTTTCCTGCAATGCAAATTTGGGAAAGGTCGAGAGAACGGCCCTGAATTTTTCTATGATCCCAAATATGCGTTGCGCTTGTGTCTCAAGGAAAAGAGAAGTCGTGCCTGTGTCCATATATACAGCATGATGTCTATGCATGAAGAGGCAGTAGCCCTTGCTCTTCAGATTGACCCAGAGCTTGCTATGGCTGAAGCTGATAAGGTTGAAGATGATGAAGACTTGAGAAAGAAGTTGTGGCTGATGATTGCAAAGCATGTCGTCAAGCAGGAAAAAGGAGCCAAAAGGGAAAACATAAGGAAAGCTATTGCCTTTCTCAAGGAAACTGATGGCCTTCTAAAGATTGAAGATATTTTGCCGTTCTTTCCCGACTTTGCCTTAATTGATGACTTCAAGGAAGCGATTTGCTCGTCTCTGGAGGATTACAACAAGCAAATAGAACAACTGAAAGAGGAGATGAATGATGCCACACGTGGTGCAGATAATATTAGAAATGATATCAGTGCCTTAACTCAAAGATATGCTGTGATCGACCGTGAAGAGGAATGCGGGGTTTGTAAACGTAAAATCTTGACGATGACCGGGGATTTCAGAATGGCCCAGAGTTATTTTTCAGCTGGACCACTGGCTCCTTTCTATGTATTTCCTTGTGGACATTCTTTCCATGCACAGTGCCTGATCACACACGTCACAAGCTGTGCACACGAAGAGCAAGCCGAGCATATACTCGATCTGCAGAAGCAGCTGACATTGCTTGGTAGCGAACCGCCGAGGAATATAAATGGTAATCGATCTGATGAACCCATAACGAGCACAACTACTGCAGACAAGCTTCGATCAGAGCTAGATGATGCTATCGCCAGTGAATGCCCATTCTGTGGAGAACTAATGATCAATGAGATCAGTCTGCCTTTTATTAAACCCGAGGAAACGCAACATTCTGCTTCATGGGACCTCCGACCACAAACCAACTTAGCTAACCAGAGGACCATTTCTTTGCCTGTTTGA
Protein:  
MDQGRQVFAVDLLERYATKNRGMITCMASGNDVIVLGTSKGWIIRHDFGLGSSYDIDLSVGRTGDQSIHKVFVDPGGSHCVATVTGVGGAETFYTHAKWPKPRVLSRLKGLLVNAVAWNKQQITEVSTKEIILGTQDGQLFEMAVDEKDKREKYVKFLFELEELPEAFMDLQMETANISSGMRYYVMAVTPTRLYSFTGIGTLESVFASYKERAVRFMELPGEIPNSELHFFIKQRRAVHFAWLSGTGIYHGGLNFGAQHSNPNGDENFVESKALLDYSKLSDGTEVVKPSSMALSEYHFLLLIGNKVKVVNRISEQIIEELHFDISADSASRGIIGLCSDASAGLFYAYDQNSIFQVSVIDESRDMWKVHLDLKDYAAALANCRDPLQRDQVYLVQAEAAFANKEYLRAASFYAKVNYVISFEEVTLKFISINELESLRTFLLRKLDTLSKNDKCQITMISTWATELYLDKINRLLLEDDTAIENRNSEYHSVIQEFRAFMSDSKDVLDEATTMKLLESYGRVEELVYFANLKEQYEIVIHHYIQQGEAKKALEVLQKSSVSEELQYKFAPELIMLDAYETVEAWMASKNLNPRRLITAMMRYSSEPHAKNETHEVIKYLEFCVHQLHNEDPGIHNLLLSLYAKQEDDSALLRFLQCKFGKGRENGPEFFYDPKYALRLCLKEKRSRACVHIYSMMSMHEEAVALALQIDPELAMAEADKVEDDEDLRKKLWLMIAKHVVKQEKGAKRENIRKAIAFLKETDGLLKIEDILPFFPDFALIDDFKEAICSSLEDYNKQIEQLKEEMNDATRGADNIRNDISALTQRYAVIDREEECGVCKRKILTMTGDFRMAQSYFSAGPLAPFYVFPCGHSFHAQCLITHVTSCAHEEQAEHILDLQKQLTLLGSEPPRNINGNRSDEPITSTTTADKLRSELDDAIASECPFCGELMINEISLPFIKPEETQHSASWDLRPQTNLANQRTISLPV